Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846493.1_cds_XP_016509668.1_22577
CDS Infomation

[gene=LOC107827115] [db_xref=GeneID:107827115] [protein=F-box/FBD/LRR-repeat protein At1g13570-like isoform X2] [protein_id=XP_016509668.1] [location=complement(join(797..1108,1208..1372,1465..2298))] [gbkey=CDS]
Sequence

ATGATGTATCCTACGGGCAGAAGGCAGTATCGCTATCGAACTTTACCTCCTGATATACTT
AGCAACCTTCCTCAGAAAGTAATTGATGAAATTCTTATTTGTTTGCCTTTGCGAGATGCT
GTGAGGACTAGCATCTTGTCGAAGAAATGGAGATATATATGGCGTAGACTTCCACAATTG
ACGCTTGAGCACACACTTTGGAAAAAAAGAGAGGATATAACGGACCTTACAAGAAACTTT
TCAGAGATTGTCAGGCACATTTATTGCTATCATGCAGGACCAATTAAAAAATTTACCCTC
TGCATTCCTTATTTGGATTTGGACCGCCGCTGTCCTTATATTGACAGATTGATAAGTTTC
CTCAGTAGAAATGGCATTCAACATCTTGTTCTTAGACTTCCAATCAGGGGTAACTCGTAT
GAATTGCCGCCATTGTTTTTCACATGTTTCCAGTTGAGGCATCTGACTCTCTATAATTGC
TCAATGAATCATCCACCACACTTCAAAGGGTTTGATTGGTTAACTAGCCTAGAACTACAT
GATGTTACAATATCTTCCAAGTTGCTTGAACGATTAATCTCTCGTTCCCCGTTGCTTGAG
CAGTTCGTGCTGCATATCTCAGGTGCTTTAAGCAACGTCATTGAAATTAGTGCTCCCATG
CTGAGATCCTTTGACTACACAGGCAATATAAGCTCTGTCTTGTTAAAAAATGTTCCTCTT
CTGGCAAAATTTTCACTTTCGCAAAGGGAATATCATGTGGCAGCAGGAAAATGTAATATC
GCCATGTTTTTTGAGTCTTTTTCTGCTCTCGAGCATCTCCACTTGAATGACATGTCCTTT
GTTGCAGGAGCTGGTGAAATACCAACAAGGCTTCCGTTTAACCTTAACTATGTCAAACAC
GTATGTATATCTAGTATTTATCTGTCTGACTTGGATGAGGTTTCATGTGCTCTTTGCTTG
ATAAGAAGCTTCCCATATTTACAGTATATGGAAATGAAGGTGGAGGCTAGTGACGACAAT
GATATACTGGCTCTTGAATCTCTTGAAGTGGAACGCTTCTCAGATGTGACATTTAATCAC
CTCAGGGAAGTTAAGCTAATACAAACTAACGGCACAATCCCTGAAATGCAGCTTATGAAG
CTTCTGTTGGCCAAGTCACCCAGGCTTGTGAGAATGCTAATCGAGCCATGTCTCGTTGAA
GAATCTGCAACAGTCAAAATACTTGCTGAGCTAACAAAACTTAAGCGGGCATCACCTAAA
GCTGAAGTTGTATATAAGTTGGATAAGCATCCAAATCTCGGTCCTGTCTGA

Peptide Sequence

PEP ID

XP_016509668.1
PEP Infomation

PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like isoform X2 [Nicotiana tabacum]
Sequence

MMYPTGRRQYRYRTLPPDILSNLPQKVIDEILICLPLRDAVRTSILSKKWRYIWRRLPQL
TLEHTLWKKREDITDLTRNFSEIVRHIYCYHAGPIKKFTLCIPYLDLDRRCPYIDRLISF
LSRNGIQHLVLRLPIRGNSYELPPLFFTCFQLRHLTLYNCSMNHPPHFKGFDWLTSLELH
DVTISSKLLERLISRSPLLEQFVLHISGALSNVIEISAPMLRSFDYTGNISSVLLKNVPL
LAKFSLSQREYHVAAGKCNIAMFFESFSALEHLHLNDMSFVAGAGEIPTRLPFNLNYVKH
VCISSIYLSDLDEVSCALCLIRSFPYLQYMEMKVEASDDNDILALESLEVERFSDVTFNH
LREVKLIQTNGTIPEMQLMKLLLAKSPRLVRMLIEPCLVEESATVKILAELTKLKRASPK
AEVVYKLDKHPNLGPV

Transcript Sequence

Gene sequence data has not been registered.